SubtiBank SubtiBank
ykkB [2018-02-02T15:19:11.000Z]
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ykkB [2018-02-02T15:19:11.000Z]

similar to N-acetyltransferase
locus
BSU13080
pI
9.67
mw
19.94 kDa
protein length
172 aa Sequence Blast
gene length
516 bp Sequence Blast
function
unknown
product
unknown
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 6|Groups of genes] → [category|SW 6.6|Poorly characterized/ putative enzymes]

    • Gene

    Coordinates
    1,375,777 → 1,376,295

    The protein

    Paralogous protein(s)

  • [protein|18FA5EFCD78C74296F9E52A64DA4A9D635944528|YnaD] (31,7%), [protein|6072A6EF0766F3D1B1616A20CDC36CCDC6CBDA71|YjcK] (30.3%)

    • Structure

  • [PDB|3FBU] (from ''Bacillus Anthracis'', 35% identity)

    • Expression and Regulation

    Operons

    genes
    [gene|2FCC71494ABD640AB009B155299EA888B88F90A3|bstF]-[gene|F92B7EC7A00BF295666D68613932D239F92C7347|ykkB]
    description
    [Pubmed|27965289]
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    Biological materials

    Mutant

  • MGNA-A746 (ykkB::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/746 NBRP B. subtilis, Japan]
  • BKE13080 (Δ[gene|F92B7EC7A00BF295666D68613932D239F92C7347|ykkB]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE13080 BGSC], [Pubmed|28189581], upstream reverse: _UP1_AATTCGATCAGTCACAAGCT, downstream forward: _UP4_TGAAAGATAGAGCTGAGTTT
  • BKK13080 (Δ[gene|F92B7EC7A00BF295666D68613932D239F92C7347|ykkB]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK13080 BGSC], [Pubmed|28189581], upstream reverse: _UP1_AATTCGATCAGTCACAAGCT, downstream forward: _UP4_TGAAAGATAGAGCTGAGTTT

    • References

  • 27965289